Publications

Tim Leung (2025). Stochastic Control Approach to Futures Trading, World Scientific

Dynamical importance and network perturbations. Ethan Young and Mason A. Porter. Physical Review E 110 (6): 064304, 2024.

Le, H.V., Lopez Cruz, D. CEO compensation and risk taking: S&P 1500 firms. Bus Econ(2024). https://doi.org/10.1057/s11369-024-00381-3

Le, V., Nagpal, C., & Dubrawski, A. (2023). Identification of patients with stable coronary artery disease who benefit from ACE inhibitors using Cox mixture model for heterogeneous treatment effects. Journal of Critical Care, 74, 154208.

Bradley C. Naylor, Christian N. K. Anderson, Marcus Hadfield, David H. Parkinson, Austin Ahlstrom, Austin Hannemann, Chad R. Quilling, Kyle J. Cutler, Russell L. Denton, Robert Adamson, Thomas E. Angel, Rebecca S. Burlett, Paul S. Hafen, John. C. Dallon, Mark K. Transtrum, Robert D. Hyldahl, and John C. Price. 

"Utilizing Nonequilibrium Isotope Enrichments to Dramatically Increase Turnover Measurement Ranges in Single Biopsy Samples from Humans" (Sep 2022). 

Journal of Proteome Research 2022 21 (11), 2703-2714. 

DOI: 10.1021/acs.jproteome.2c00380. 

Link: https://pubs.acs.org/doi/10.1021/acs.jproteome.2c00380

Liu, Y.H., Smith, S., Mihalas S., Shea-Brown E., Sumbul U., “Biologically-plausible backpropagation through arbitrary timespans via local neuromodulators”, Advances in Neural Information Processing Systems, 2022.

Angelini E, Wang Y, Zhou JX, Qian H, Huang S (2022) A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness. PLoS Comput Biol 18(7): e1010319. https://doi.org/10.1371/journal.pcbi.1010319

Liu, Y.H., Ghosh A., Richards B. A., Shea-Brown E., Lajoie G., “Beyond accuracy: generalization properties of bio-plausible temporal credit assignment rules”, Advances in Neural Information Processing Systems, 2022. 

Tim Leung. (2021) Employee Stock Options, Exercise Timing, Hedging, and Valuation. World Scientific

Maass, K., Aravkin, A., & Kim, M. (2021). A feasibility study of a hyperparameter tuning approach to automated inverse planning in radiotherapy. arXiv preprint arXiv: arXiv:2105.07024.

Yang, Y.-J. and Cheng, Y.-C., "Potentials of continuous Markov processes and random perturbations"  J. Phys. A: Math. Theor. 54 195001 (2021)

Yang, Y.-J., & Qian, H. Bivectorial Nonequilibrium Thermodynamics: Cycle Affinity, Vorticity Potential, and Onsager’s Principle. J Stat. Phys. 182, 46 (2021). 

Liu, Y.H., Smith, S.J., Mihalas S., Shea-Brown E., Sumbul U., “Cell-type–specific neuromodulation guides synaptic credit assignment in a spiking neural network”, Proceedings of the National Academy of Sciences, 2021.

Liu, Y.H., Smith, S.J., Mihalas S., Shea-Brown E., Sumbul U., “A solution to temporal credit assignment using cell-type-specific modulatory signals”, bioRxiv, 2020.

Yang, Y.-J. & Qian, H. Unified formalism for entropy production and fluctuation relations. Phys. Rev. E 101 , 022129 (2020)

 Maass, K., Kim, M., & Aravkin, A. (2020). A nonconvex optimization approach to IMRT planning with dose-volume constraints. arXiv preprint arXiv:1907.10712. 

Ahlstrom, Austin, "Computational Regiospecific Analysis of Brain Lipidomic Profiles" (2019). Undergraduate Honors Theses. 70.  
https://scholarsarchive.byu.edu/studentpub_uht/70

Maass, K., & Kim, M. (2019). A Markov decision process approach to optimizing cancer therapy using multiple modalities. Mathematical Medicine and Biology: A Journal of the IMA. doi:10.1093/imammb/dqz004.

Chen, X. and K. K. Tung: "Global surface warming enhanced by weak Atlantic overturning circulation", Nature, 559, 387-391, July 2018.

Liu, Hexuan, Jimin Kim, and Eli Shlizerman. "Functional connectomics from neural dynamics: probabilistic graphical models for neuronal network of Caenorhabditis elegans." Philosophical Transactions of the Royal Society B: Biological Sciences 373.1758 (2018): 20170377.

D. Rim, S. Moe, and R. J. LeVeque, Transport Reversal for Model Reduction of Hyperbolic Partial Differential Equations, SIAM/ASA Journal on Uncertainty Quantification 6(2018), pp. 118-150. doi:10.1137/17M1113679

Hong Qian. (2017) Mathematical Kinetic Models: Applications in Biophysics and Biochemistry. Peking University Press. 

Barker, Blake, Rose Nguyen, Bjorn Sandstede, Nathaniel Ventura, and Colin Wahl. "Computing Evans functions numerically via boundary-value problems." Physica D: Nonlinear Phenomena. Accepted Dec 2017.

J. Nathan Kutz, Steven L. Brunton, Bingni W. Brunton, and Joshua Proctor (2016). Dynamic Mode Decomposition: Data-Driven Modeling of Complex Systems. SIAM.

Tim Leung and Marco Santoli (2016). Leveraged Exchange-Traded Funds: Price Dynamics and Options Valuation, Springer Briefs in Quantitative Finance, Springer, New York.