Publications and Projects

Author/Title Research Type Related Fields
Le, V., Nagpal, C., & Dubrawski, A. (2023). Identification of patients with stable coronary artery disease who benefit from ACE inhibitors using Cox mixture model for heterogeneous treatment effects. Journal of Critical Care74, 154208. Publications, Articles
Author/Title Research Type Related Fields
Bradley C. Naylor, Christian N. K. Anderson, Marcus Hadfield, David H. Parkinson, Austin Ahlstrom, Austin Hannemann, Chad R. Quilling, Kyle J. Cutler, Russell L. Denton, Robert Adamson, Thomas E. Angel, Rebecca S. Burlett, Paul S. Hafen, John. C. Dallon, Mark K. Transtrum, Robert D. Hyldahl, and John C. Price.  "Utilizing Nonequilibrium Isotope Enrichments to Dramatically Increase Turnover Measurement Ranges in Single Biopsy Samples from Humans" (Sep 2022).  Journal of Proteome Research 2022 21 (11), 2703-2714.  DOI: 10.1021/acs.jproteome.2c00380.  Link: https://pubs.acs.org/doi/10.1021/acs.jproteome.2c00380 Publications, Articles
Author/Title Research Type Related Fields
Liu, Y.H., Smith, S., Mihalas S., Shea-Brown E., Sumbul U., “Biologically-plausible backpropagation through arbitrary timespans via local neuromodulators”, Advances in Neural Information Processing Systems, 2022. Publications, Articles
Liu, Y.H., Ghosh A., Richards B. A., Shea-Brown E., Lajoie G., “Beyond accuracy: generalization properties of bio-plausible temporal credit assignment rules”, Advances in Neural Information Processing Systems, 2022.  Publications, Articles
Author/Title Research Type Related Fields
Angelini E, Wang Y, Zhou JX, Qian H, Huang S (2022) A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness. PLoS Comput Biol 18(7): e1010319. https://doi.org/10.1371/journal.pcbi.1010319 Publications
Author/Title Research Type Related Fields
Tim Leung. (2021) Employee Stock Options, Exercise Timing, Hedging, and Valuation. World Scientific Publications, Books
Maass, K., Aravkin, A., & Kim, M. (2021). A feasibility study of a hyperparameter tuning approach to automated inverse planning in radiotherapy. arXiv preprint arXiv: arXiv:2105.07024. Publications, Articles
Yang, Y.-J. and Cheng, Y.-C., "Potentials of continuous Markov processes and random perturbations"  J. Phys. A: Math. Theor. 54 195001 (2021) Publications, Articles
Yang, Y.-J., & Qian, H. Bivectorial Nonequilibrium Thermodynamics: Cycle Affinity, Vorticity Potential, and Onsager’s Principle. J Stat. Phys. 182, 46 (2021).   Publications, Articles
Liu, Y.H., Smith, S.J., Mihalas S., Shea-Brown E., Sumbul U., “Cell-type–specific neuromodulation guides synaptic credit assignment in a spiking neural network”, Proceedings of the National Academy of Sciences, 2021. Publications, Articles
Author/Title Research Type Related Fields
Liu, Y.H., Smith, S.J., Mihalas S., Shea-Brown E., Sumbul U., “A solution to temporal credit assignment using cell-type-specific modulatory signals”, bioRxiv, 2020. Publications, Articles
Yang, Y.-J. & Qian, H. Unified formalism for entropy production and fluctuation relations. Phys. Rev. E 101 , 022129 (2020) Publications, Articles
 Maass, K., Kim, M., & Aravkin, A. (2020). A nonconvex optimization approach to IMRT planning with dose-volume constraints. arXiv preprint arXiv:1907.10712.  Publications, Articles